Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm26016-201ENSMUST00000104403 129 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm12635-201ENSMUST00000117285 752 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm15421-202ENSMUST00000118224 399 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm14729-201ENSMUST00000118373 689 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm14466-201ENSMUST00000119028 451 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm13900-201ENSMUST00000119402 498 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm14465-201ENSMUST00000120603 567 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm22035-201ENSMUST00000157284 228 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm25180-201ENSMUST00000157746 115 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm22993-201ENSMUST00000175423 254 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm21392-201ENSMUST00000182950 972 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Mir6940-201ENSMUST00000183447 70 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm19124-201ENSMUST00000191041 832 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm38268-201ENSMUST00000195813 193 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm2860-201ENSMUST00000199226 707 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm44656-201ENSMUST00000208428 490 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 AC154562.1-201ENSMUST00000226140 966 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H2afb3S4R1G7 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm25509-201ENSMUST00000116985 106 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm15105-201ENSMUST00000117777 204 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm13988-201ENSMUST00000119363 288 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm15103-201ENSMUST00000119893 871 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm8577-201ENSMUST00000122420 986 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm16284-201ENSMUST00000140995 400 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm26182-201ENSMUST00000157688 116 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Mir1930-201ENSMUST00000158799 84 ntBASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC6.01□□□□□ -1.45
H2afb3S4R1G7 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms