Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Gm20612-201ENSMUST00000176318 236 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Mir6403-201ENSMUST00000185007 129 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Gm17965-201ENSMUST00000193904 517 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Ighv1-17-201ENSMUST00000194435 350 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Gm4574-201ENSMUST00000207804 542 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 CT030662.2-201ENSMUST00000226942 805 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 AC133654.1-201ENSMUST00000228411 672 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Gm22748-201ENSMUST00000082493 136 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Gm19176-201ENSMUST00000222149 1831 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Gm232-201ENSMUST00000216549 2559 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.95□□□□□ -0.98
Ube3bQ9ES34 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm37995-201ENSMUST00000194958 1714 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm23942-201ENSMUST00000101956 107 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm26016-201ENSMUST00000104403 129 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm15001-201ENSMUST00000117657 795 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm12392-201ENSMUST00000118014 938 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm8916-201ENSMUST00000119732 949 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm24002-201ENSMUST00000158456 104 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm3221-201ENSMUST00000164869 440 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm3611-201ENSMUST00000173687 877 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm28803-201ENSMUST00000190385 764 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm43295-201ENSMUST00000201439 412 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Mir465-201ENSMUST00000093563 74 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.94□□□□□ -0.98
Ube3bQ9ES34 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Gm25546-201ENSMUST00000103977 132 ntBASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Gm25120-201ENSMUST00000180148 79 ntBASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Mrgpra14-201ENSMUST00000189782 913 ntBASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Gm28586-201ENSMUST00000189857 456 ntBASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Gm26413-201ENSMUST00000196783 126 ntBASIC8.93□□□□□ -0.98
Ube3bQ9ES34 Gm43768-201ENSMUST00000198380 1258 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms