Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm8534-201ENSMUST00000118553 766 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm14613-201ENSMUST00000122239 752 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm18808-201ENSMUST00000173316 462 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Mir7046-201ENSMUST00000183435 66 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm43689-201ENSMUST00000195951 427 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm44213-201ENSMUST00000204977 703 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm45122-201ENSMUST00000206376 784 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm22267-201ENSMUST00000104008 131 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Snord88a-201ENSMUST00000116723 90 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm13141-201ENSMUST00000117417 456 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm4911-201ENSMUST00000119388 945 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm13222-201ENSMUST00000119638 138 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm11198-201ENSMUST00000119771 974 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm13462-201ENSMUST00000121472 961 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm26353-201ENSMUST00000158224 255 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm21728-201ENSMUST00000188442 695 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm21889-201ENSMUST00000188487 695 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20932-201ENSMUST00000189115 694 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm28846-201ENSMUST00000189161 368 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm21920-201ENSMUST00000190042 695 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm7413-201ENSMUST00000219498 462 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm5374-202ENSMUST00000222910 314 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm24621-201ENSMUST00000082679 140 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms