Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm26417-201ENSMUST00000104274 135 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm13338-201ENSMUST00000120235 361 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm13740-201ENSMUST00000120590 310 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm4887-201ENSMUST00000122230 1053 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm6081-201ENSMUST00000134472 489 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm17022-201ENSMUST00000166415 922 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm3760-201ENSMUST00000167475 804 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm27178-201ENSMUST00000184962 340 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm6472-202ENSMUST00000187973 582 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm18849-201ENSMUST00000189861 560 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm8860-201ENSMUST00000193160 445 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm43147-201ENSMUST00000196944 542 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm6667-201ENSMUST00000217169 564 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 AC164550.1-201ENSMUST00000217821 1066 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 AC154692.1-202ENSMUST00000226632 1231 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 AC140451.1-201ENSMUST00000227984 737 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm9788-201ENSMUST00000057038 906 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Mir296-201ENSMUST00000083587 79 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Krt88Q9CPR6 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm14513-201ENSMUST00000117403 123 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm13260-201ENSMUST00000117797 1264 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Mir1930-201ENSMUST00000158799 84 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm26179-201ENSMUST00000177723 132 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm26738-201ENSMUST00000181312 601 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm20926-201ENSMUST00000194457 696 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm7943-201ENSMUST00000212078 1034 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 AV026068-218ENSMUST00000223980 575 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms