Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm46424-201ENSMUST00000221567 168 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 AC154747.1-201ENSMUST00000225265 239 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm43196-201ENSMUST00000201762 2114 ntBASIC7.84□□□□□ -1.16
Clp1Q99LI9 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.16
Clp1Q99LI9 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Clp1Q99LI9 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Clp1Q99LI9 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Clp1Q99LI9 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm8734-201ENSMUST00000211669 1312 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm8728-201ENSMUST00000207367 2178 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm8486-201ENSMUST00000207508 2171 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm8685-201ENSMUST00000207567 2183 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm16443-201ENSMUST00000207909 2184 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm2348-201ENSMUST00000108782 300 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm16458-201ENSMUST00000121428 502 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm44370-201ENSMUST00000175436 112 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm27659-201ENSMUST00000183472 98 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm3544-201ENSMUST00000196129 305 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm43493-201ENSMUST00000199837 202 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm44561-201ENSMUST00000208869 264 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm45474-201ENSMUST00000209471 408 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm46231-201ENSMUST00000220152 314 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 AC154727.1-201ENSMUST00000226537 499 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Vmn1r89-206ENSMUST00000227319 985 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Mir16-2-201ENSMUST00000083672 95 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm43080-201ENSMUST00000199006 2643 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm37150-201ENSMUST00000193900 2754 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm37121-201ENSMUST00000192219 2556 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms