Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm12385-201ENSMUST00000117439 795 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13357-201ENSMUST00000120528 537 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm5383-201ENSMUST00000121177 617 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11604-201ENSMUST00000121487 742 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13645-201ENSMUST00000145163 699 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm22158-201ENSMUST00000158411 126 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm23824-201ENSMUST00000158741 276 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm6155-201ENSMUST00000173735 341 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm21762-201ENSMUST00000177561 456 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm4823-201ENSMUST00000181990 984 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm27199-201ENSMUST00000185026 623 ntTSL 2 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm29284-201ENSMUST00000188363 255 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm17777-201ENSMUST00000189740 1276 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm38358-201ENSMUST00000195144 428 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm43856-201ENSMUST00000197004 369 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm43624-201ENSMUST00000197368 180 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm18867-201ENSMUST00000198022 1179 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm44048-201ENSMUST00000204531 361 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm44266-201ENSMUST00000205235 500 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm45227-201ENSMUST00000205585 169 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm18127-201ENSMUST00000208479 725 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm7546-202ENSMUST00000211354 275 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 AC132384.9-201ENSMUST00000218085 277 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 AC091237.1-201ENSMUST00000224911 637 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 AC170810.3-201ENSMUST00000226177 374 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 AC166344.2-201ENSMUST00000226747 374 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm9234-201ENSMUST00000077747 492 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Mir129-2-201ENSMUST00000083577 90 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 AC131743.4-201ENSMUST00000221638 1553 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Zfp750-201ENSMUST00000092298 3232 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gpx5-201ENSMUST00000110491 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm5975-201ENSMUST00000185256 1399 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm43369-201ENSMUST00000196373 1552 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm24542-201ENSMUST00000103870 110 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm22661-201ENSMUST00000104192 132 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Obp2b-201ENSMUST00000114192 732 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Rpl17-ps8-201ENSMUST00000118924 621 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11943-201ENSMUST00000119473 327 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11763-201ENSMUST00000119964 312 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms