Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm23323-201ENSMUST00000104471 133 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm13878-201ENSMUST00000117986 577 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm8644-201ENSMUST00000118619 596 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm25437-201ENSMUST00000158282 132 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm3344-201ENSMUST00000169610 603 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm18559-201ENSMUST00000208249 604 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm7151-201ENSMUST00000211511 954 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 AC154634.3-201ENSMUST00000224589 736 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 CT025686.2-201ENSMUST00000227898 3315 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Ccdc9Q8VC31 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Ccdc9Q8VC31 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.84□□□□□ -1.16
Ccdc9Q8VC31 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm37212-201ENSMUST00000192582 3650 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm19368-201ENSMUST00000221258 4424 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 AL670757.1-201ENSMUST00000223668 1959 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm23484-201ENSMUST00000104178 131 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm12874-201ENSMUST00000117190 913 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm12219-201ENSMUST00000119198 443 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm12849-201ENSMUST00000120013 739 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm15843-201ENSMUST00000146593 529 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm14747-201ENSMUST00000149888 984 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm44192-201ENSMUST00000204195 556 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm19056-201ENSMUST00000218220 797 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm4012-201ENSMUST00000221504 581 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 AC153794.2-201ENSMUST00000222650 550 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 AC159193.1-201ENSMUST00000222872 2517 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ccdc9Q8VC31 Gm42496-201ENSMUST00000197976 3241 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms