Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm11341-201ENSMUST00000122316 447 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm6726-201ENSMUST00000172786 681 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm20530-201ENSMUST00000174261 254 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm43141-201ENSMUST00000199695 274 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm45733-201ENSMUST00000212988 437 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm7413-201ENSMUST00000219498 462 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm5436-201ENSMUST00000058103 643 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm15500-201ENSMUST00000071523 894 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Zfp865-202ENSMUST00000076791 1129 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm24621-201ENSMUST00000082679 140 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Mir425-201ENSMUST00000083645 85 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 AC118639.1-203ENSMUST00000228425 2016 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm24048-201ENSMUST00000102411 106 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm23979-201ENSMUST00000104071 128 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm12439-201ENSMUST00000117162 365 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm26023-201ENSMUST00000122722 313 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm4152-201ENSMUST00000172675 259 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm23968-201ENSMUST00000175047 125 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm35323-201ENSMUST00000191836 499 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.7□□□□□ -1.18
Nup88Q8CEC0 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup88Q8CEC0 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm26079-201ENSMUST00000104066 133 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms