Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm15216-201ENSMUST00000118058 277 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm11920-201ENSMUST00000118491 563 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm22276-201ENSMUST00000122469 129 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm22235-201ENSMUST00000157085 110 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm29650-201ENSMUST00000188485 742 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm37439-201ENSMUST00000193150 856 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm7019-201ENSMUST00000194122 369 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm45626-201ENSMUST00000210093 361 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm7368-201ENSMUST00000213307 367 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm8607-201ENSMUST00000221864 431 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.65□□□□□ -1.35
Trub1Q8C0D0 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm8648-201ENSMUST00000122457 221 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm44361-201ENSMUST00000197960 94 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm19088-201ENSMUST00000198800 566 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm6419-201ENSMUST00000097166 429 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.64□□□□□ -1.35
Trub1Q8C0D0 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trub1Q8C0D0 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm24048-201ENSMUST00000102411 106 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm23979-201ENSMUST00000104071 128 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm16511-201ENSMUST00000120019 564 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm26486-201ENSMUST00000158021 110 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms