Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Wdr45-202ENSMUST00000115687 1299 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm18859-201ENSMUST00000118792 825 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm11225-201ENSMUST00000118903 1049 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm13903-201ENSMUST00000120945 193 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm24912-201ENSMUST00000157291 117 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm24005-201ENSMUST00000158459 296 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm24675-201ENSMUST00000158757 259 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm26731-201ENSMUST00000180683 543 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm27470-201ENSMUST00000184070 210 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm8600-201ENSMUST00000186320 905 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm28534-201ENSMUST00000187744 676 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm28506-201ENSMUST00000189937 150 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Ighv8-3-201ENSMUST00000194985 295 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm43286-201ENSMUST00000197420 424 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm45049-201ENSMUST00000207586 591 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm2996-201ENSMUST00000211398 537 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm18587-201ENSMUST00000213736 841 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 AC122360.1-201ENSMUST00000217737 624 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm46327-201ENSMUST00000218240 365 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 AC134869.2-201ENSMUST00000225788 421 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 AC123698.1-201ENSMUST00000227090 402 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 AC154598.2-201ENSMUST00000227114 604 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm25081-201ENSMUST00000082534 108 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm38215-201ENSMUST00000192321 2233 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Sh3bgrl2-204ENSMUST00000188241 3155 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 AC113059.1-201ENSMUST00000181185 2777 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Bag3-201ENSMUST00000033136 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Acsl6-207ENSMUST00000101213 2730 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Prokr2-203ENSMUST00000110157 4005 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Slco2b1-201ENSMUST00000032985 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Vmn2r56-201ENSMUST00000163852 2340 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Peg13-201ENSMUST00000202826 4725 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 B020018J22Rik-201ENSMUST00000223085 3223 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm16023-201ENSMUST00000137752 2490 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm19125-201ENSMUST00000188408 1383 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm19589-201ENSMUST00000189394 2623 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Rc3h2-203ENSMUST00000112936 5828 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm5721-201ENSMUST00000119845 1696 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Cldn8-201ENSMUST00000049697 2356 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Nmnat2-201ENSMUST00000043313 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Agmo-204ENSMUST00000160390 2194 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm42989-201ENSMUST00000200646 2306 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Dpysl3-202ENSMUST00000118043 1986 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Olfr333-ps1-202ENSMUST00000218459 1993 ntTSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm24556-201ENSMUST00000104547 130 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm4877-201ENSMUST00000104977 798 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm13176-201ENSMUST00000117910 477 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm8754-201ENSMUST00000118391 520 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Mfap5-202ENSMUST00000118626 748 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm11472-201ENSMUST00000121305 556 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm25106-201ENSMUST00000122672 134 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm11832-201ENSMUST00000148576 432 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm23985-201ENSMUST00000157140 124 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm22669-201ENSMUST00000158723 318 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm17081-201ENSMUST00000167363 478 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm23151-201ENSMUST00000178061 107 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm9476-201ENSMUST00000179109 696 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm17412-201ENSMUST00000179261 468 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm25473-201ENSMUST00000180191 107 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm24306-201ENSMUST00000180229 79 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm7656-201ENSMUST00000182468 1004 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Mir6378-201ENSMUST00000183357 107 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm28146-201ENSMUST00000185517 701 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm28574-201ENSMUST00000185757 699 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm2324-201ENSMUST00000187464 662 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm28397-201ENSMUST00000187970 699 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm29597-201ENSMUST00000188035 308 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm29366-201ENSMUST00000190481 699 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm18299-201ENSMUST00000192026 636 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms