Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Rnu11-201ENSMUST00000104135 134 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm6181-201ENSMUST00000117187 264 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm16531-201ENSMUST00000180658 967 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 AC124103.1-201ENSMUST00000227564 1027 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm6866-201ENSMUST00000188559 2549 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 AC166574.5-201ENSMUST00000227438 1432 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm2182-201ENSMUST00000145243 663 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm2058-201ENSMUST00000178791 560 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm4332-201ENSMUST00000196114 346 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm44361-201ENSMUST00000197960 94 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm4587-201ENSMUST00000209135 637 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm45874-201ENSMUST00000212423 346 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 AC159205.7-201ENSMUST00000225988 692 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm8878-201ENSMUST00000173552 1725 ntBASIC5.67□□□□□ -1.5
Rif1Q6PR54 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rif1Q6PR54 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 AC122426.1-201ENSMUST00000214736 2235 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm5334-201ENSMUST00000187472 720 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm43456-201ENSMUST00000202519 457 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm6474-201ENSMUST00000223250 699 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Clec2j-201ENSMUST00000032517 515 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm8728-201ENSMUST00000207367 2178 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm8486-201ENSMUST00000207508 2171 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm8685-201ENSMUST00000207567 2183 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm16443-201ENSMUST00000207909 2184 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Gm45537-201ENSMUST00000211539 2708 ntBASIC5.66□□□□□ -1.5
Rif1Q6PR54 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Rif1Q6PR54 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms