Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm23657-201ENSMUST00000122623 294 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm26371-201ENSMUST00000157829 104 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Mir466b-4-201ENSMUST00000178801 90 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm25285-201ENSMUST00000178951 90 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Mir466b-6-201ENSMUST00000180061 90 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Mir466c-2-201ENSMUST00000180211 90 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Mir8097-201ENSMUST00000185150 119 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm44356-201ENSMUST00000196731 111 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm17833-201ENSMUST00000197629 1065 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm29815-201ENSMUST00000202418 178 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm38840-201ENSMUST00000204716 843 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clcn1Q64347 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 AC192333.1-201ENSMUST00000224573 376 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 AC133654.1-201ENSMUST00000228411 672 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm22043-201ENSMUST00000082993 158 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Clcn1Q64347 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm12024-201ENSMUST00000118819 1253 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm12988-201ENSMUST00000119054 478 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm11474-201ENSMUST00000120814 277 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm7746-201ENSMUST00000120966 503 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm24682-201ENSMUST00000158764 137 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm22111-201ENSMUST00000178010 79 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm23687-201ENSMUST00000178664 79 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm24566-201ENSMUST00000179286 79 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm23305-201ENSMUST00000179342 79 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm26389-201ENSMUST00000179819 79 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm22130-201ENSMUST00000179979 79 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm22393-201ENSMUST00000180153 79 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm25085-201ENSMUST00000180298 79 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm18407-201ENSMUST00000192126 790 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm8539-201ENSMUST00000199822 501 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm2961-201ENSMUST00000211074 772 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC9.61□□□□□ -0.87
Clcn1Q64347 AC154382.1-201ENSMUST00000220958 1282 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 CT009733.1-202ENSMUST00000224941 441 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 AC122459.3-201ENSMUST00000228508 1042 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Clcn1Q64347 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Clcn1Q64347 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC9.61□□□□□ -0.87
Clcn1Q64347 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clcn1Q64347 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC9.61□□□□□ -0.87
Clcn1Q64347 AC147639.2-202ENSMUST00000224834 1545 ntBASIC9.61□□□□□ -0.87
Clcn1Q64347 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms