Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm22094-201ENSMUST00000158976 117 ntBASIC7.75□□□□□ -1.17
Vps54Q5SPW0 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm22548-201ENSMUST00000174899 78 ntBASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Mir5107-201ENSMUST00000175586 88 ntBASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm26442-201ENSMUST00000082588 153 ntBASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.75□□□□□ -1.17
Vps54Q5SPW0 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm12937-201ENSMUST00000118333 448 ntBASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm16511-201ENSMUST00000120019 564 ntBASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Mir1960-201ENSMUST00000157488 78 ntBASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm25904-201ENSMUST00000158491 143 ntBASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.74□□□□□ -1.17
Vps54Q5SPW0 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms