Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm6743-201ENSMUST00000117345 1066 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm13728-201ENSMUST00000117471 400 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm15659-201ENSMUST00000118881 341 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm11928-201ENSMUST00000119323 437 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm12104-201ENSMUST00000120359 979 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm13622-201ENSMUST00000120658 433 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm24635-201ENSMUST00000122712 128 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm17177-201ENSMUST00000169144 483 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm23799-201ENSMUST00000175559 120 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Mir8105-201ENSMUST00000184718 89 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm29008-201ENSMUST00000189387 298 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm18655-201ENSMUST00000214802 1090 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 AC153852.1-201ENSMUST00000217881 567 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm24036-201ENSMUST00000082868 156 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm45767-201ENSMUST00000212778 4561 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm37460-201ENSMUST00000191796 2249 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm37010-201ENSMUST00000194539 1704 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm43430-201ENSMUST00000196513 3897 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 AC168056.4-201ENSMUST00000223835 2567 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm14985-201ENSMUST00000118693 786 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm14883-201ENSMUST00000120179 157 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm25117-201ENSMUST00000157194 144 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Pea15b-201ENSMUST00000182806 387 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm43476-201ENSMUST00000197873 405 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 AC164295.1-201ENSMUST00000224861 186 ntBASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim41Q5NCC3 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm44745-201ENSMUST00000206563 2723 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm29761-201ENSMUST00000215964 1939 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm11880-201ENSMUST00000117612 399 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm11984-201ENSMUST00000118142 766 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm16056-201ENSMUST00000119293 135 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm13462-201ENSMUST00000121472 961 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm13024-201ENSMUST00000121756 718 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm23897-201ENSMUST00000158110 158 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm24680-201ENSMUST00000158759 126 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm6366-201ENSMUST00000198766 826 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm4751-201ENSMUST00000200620 1105 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim41Q5NCC3 AC154382.1-201ENSMUST00000220958 1282 ntBASIC13.16□□□□□ -0.3
Trim41Q5NCC3 AC122034.1-201ENSMUST00000227641 595 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms