Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm19028-201ENSMUST00000189614 1873 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm14751-201ENSMUST00000117693 222 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm14466-201ENSMUST00000119028 451 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm8421-201ENSMUST00000119439 305 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm12773-201ENSMUST00000120134 587 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm12402-201ENSMUST00000120536 334 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm16471-201ENSMUST00000121940 618 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm26487-201ENSMUST00000158022 94 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm24050-201ENSMUST00000158623 290 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm17022-201ENSMUST00000166415 922 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm8046-201ENSMUST00000172151 616 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm20396-201ENSMUST00000173358 745 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm22254-201ENSMUST00000179186 110 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm18620-201ENSMUST00000222295 324 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm18960-201ENSMUST00000222962 713 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a1Q00780 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm23734-201ENSMUST00000083753 109 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.2□□□□□ -1.42
Col8a1Q00780 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms