Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm13772-201ENSMUST00000118431 317 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm4997-201ENSMUST00000154056 360 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm6726-201ENSMUST00000172786 681 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm20620-201ENSMUST00000177528 168 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm46364-201ENSMUST00000218548 319 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm25133-201ENSMUST00000082647 130 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm24695-201ENSMUST00000083877 83 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Sec24c-202ENSMUST00000223751 4196 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm43335-201ENSMUST00000198299 3276 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm11879-201ENSMUST00000121885 702 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm25387-201ENSMUST00000157813 132 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Mir7072-201ENSMUST00000184542 60 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm18447-201ENSMUST00000187501 307 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm28918-201ENSMUST00000188822 699 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm18952-201ENSMUST00000194471 846 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm10416-201ENSMUST00000197379 645 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm44091-201ENSMUST00000205212 649 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm45739-201ENSMUST00000213094 388 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm18112-201ENSMUST00000219862 1195 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.72□□□□□ -1.49
Nkx3-1P97436 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx3-1P97436 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Nkx3-1P97436 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Nkx3-1P97436 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Nkx3-1P97436 Gm38009-201ENSMUST00000194884 3341 ntBASIC5.71□□□□□ -1.49
Nkx3-1P97436 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
Nkx3-1P97436 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms