Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PrkdcP97313 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PrkdcP97313 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PrkdcP97313 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm6620-201ENSMUST00000120113 715 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm42961-201ENSMUST00000202023 181 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Gm5436-201ENSMUST00000058103 643 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.3□□□□□ -1.72
PrkdcP97313 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm8032-201ENSMUST00000171009 574 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm44132-201ENSMUST00000205142 151 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC4.3□□□□□ -1.72
PrkdcP97313 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm2065-201ENSMUST00000194697 2757 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Gm42630-201ENSMUST00000195908 3448 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Mir1193-201ENSMUST00000116761 121 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm24741-201ENSMUST00000158857 106 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 AC116591.1-201ENSMUST00000227919 351 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm14331-201ENSMUST00000120396 409 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Gm22789-201ENSMUST00000157884 130 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC4.29□□□□□ -1.72
PrkdcP97313 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PrkdcP97313 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms