Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm5528-201ENSMUST00000076314 480 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Snora9-201ENSMUST00000082579 133 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm45762-201ENSMUST00000212863 2619 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm13196-201ENSMUST00000118297 379 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm11761-201ENSMUST00000121392 445 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm11385-201ENSMUST00000121513 570 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm17217-201ENSMUST00000166613 469 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm4373-201ENSMUST00000178571 556 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm37632-201ENSMUST00000191811 1142 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm43093-201ENSMUST00000202439 1213 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm18329-201ENSMUST00000215832 589 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Hmgb1P63158 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 AC174797.3-203ENSMUST00000225749 2078 ntBASIC7.66□□□□□ -1.18
Hmgb1P63158 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Hmgb1P63158 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC7.65□□□□□ -1.18
Hmgb1P63158 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Hmgb1P63158 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Hmgb1P63158 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Hmgb1P63158 Gm24986-201ENSMUST00000104452 132 ntBASIC7.65□□□□□ -1.18
Hmgb1P63158 Gm26146-201ENSMUST00000104478 185 ntBASIC7.65□□□□□ -1.18
Hmgb1P63158 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Hmgb1P63158 Gm13930-201ENSMUST00000118569 368 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms