Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm9274-201ENSMUST00000182505 984 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.48□□□□□ -1.37
Fdft1P53798 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm18012-201ENSMUST00000204558 773 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.48□□□□□ -1.37
Fdft1P53798 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm46311-201ENSMUST00000217971 203 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm31711-201ENSMUST00000220687 196 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Fdft1P53798 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Fdft1P53798 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.48□□□□□ -1.37
Fdft1P53798 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
Fdft1P53798 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.48□□□□□ -1.37
Fdft1P53798 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Fdft1P53798 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm11553-201ENSMUST00000120682 240 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Gm12094-201ENSMUST00000121781 472 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Gm27970-201ENSMUST00000184854 407 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Gm43377-201ENSMUST00000201640 455 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Gm44147-201ENSMUST00000204658 94 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.47□□□□□ -1.37
Fdft1P53798 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.47□□□□□ -1.37
Fdft1P53798 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.47□□□□□ -1.37
Fdft1P53798 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Fdft1P53798 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Fdft1P53798 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.47□□□□□ -1.37
Fdft1P53798 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.47□□□□□ -1.37
Fdft1P53798 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Fdft1P53798 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Fdft1P53798 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Fdft1P53798 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Fdft1P53798 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.46□□□□□ -1.37
Fdft1P53798 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Fdft1P53798 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Fdft1P53798 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.46□□□□□ -1.37
Fdft1P53798 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Fdft1P53798 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.46□□□□□ -1.37
Fdft1P53798 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Fdft1P53798 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Fdft1P53798 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.46□□□□□ -1.38
Fdft1P53798 Gm4997-201ENSMUST00000154056 360 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm25962-201ENSMUST00000157173 168 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm26321-201ENSMUST00000157740 242 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Fdft1P53798 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Fdft1P53798 Gm20690-201ENSMUST00000177341 315 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Mir6348-201ENSMUST00000183804 120 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.46□□□□□ -1.38
Fdft1P53798 Gm28620-201ENSMUST00000190463 439 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm37620-201ENSMUST00000192910 501 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm37526-201ENSMUST00000194640 619 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm32983-201ENSMUST00000208500 505 ntBASIC6.46□□□□□ -1.38
Fdft1P53798 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.46□□□□□ -1.38
Fdft1P53798 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms