Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
Cux1P53564 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Gm11885-201ENSMUST00000118473 1428 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Gm14000-201ENSMUST00000118670 233 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Gm13604-201ENSMUST00000119332 482 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC9.93□□□□□ -0.82
Cux1P53564 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cux1P53564 Gm29201-201ENSMUST00000189120 431 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Gm37758-201ENSMUST00000194275 629 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Gm19060-201ENSMUST00000201959 421 ntBASIC9.93□□□□□ -0.82
Cux1P53564 A1cf-203ENSMUST00000224400 1204 ntBASIC9.93□□□□□ -0.82
Cux1P53564 AL669819.1-201ENSMUST00000225143 330 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Cux1P53564 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC9.93□□□□□ -0.82
Cux1P53564 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC9.93□□□□□ -0.82
Cux1P53564 Gm5702-201ENSMUST00000185629 2469 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Cux1P53564 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 AC125328.1-201ENSMUST00000226812 2265 ntBASIC9.93□□□□□ -0.82
Cux1P53564 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cux1P53564 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Cux1P53564 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cux1P53564 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cux1P53564 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC9.92□□□□□ -0.82
Cux1P53564 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC9.92□□□□□ -0.82
Cux1P53564 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC9.92□□□□□ -0.82
Cux1P53564 Gm7891-201ENSMUST00000190284 843 ntBASIC9.92□□□□□ -0.82
Cux1P53564 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 AC157572.4-201ENSMUST00000228203 549 ntBASIC9.92□□□□□ -0.82
Cux1P53564 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Cux1P53564 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Cux1P53564 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 Gm44185-201ENSMUST00000204539 3307 ntBASIC9.92□□□□□ -0.82
Cux1P53564 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC9.92□□□□□ -0.82
Cux1P53564 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Cux1P53564 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Cux1P53564 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC9.92□□□□□ -0.82
Cux1P53564 Gm13998-201ENSMUST00000120952 335 ntBASIC9.92□□□□□ -0.82
Cux1P53564 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC9.92□□□□□ -0.82
Cux1P53564 Trav3n-2-201ENSMUST00000197693 334 ntBASIC9.92□□□□□ -0.82
Cux1P53564 Trav3d-2-201ENSMUST00000199874 334 ntBASIC9.92□□□□□ -0.82
Cux1P53564 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC9.92□□□□□ -0.82
Cux1P53564 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cux1P53564 Gm9269-201ENSMUST00000221661 578 ntBASIC9.92□□□□□ -0.82
Cux1P53564 AC113198.1-201ENSMUST00000226353 832 ntBASIC9.92□□□□□ -0.82
Cux1P53564 Gm23456-201ENSMUST00000083335 137 ntBASIC9.92□□□□□ -0.82
Cux1P53564 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Cux1P53564 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cux1P53564 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC9.91□□□□□ -0.82
Cux1P53564 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 125.2 ms