Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Rfx3P48381 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
Rfx3P48381 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.9□□□□□ -1.47
Rfx3P48381 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Rfx3P48381 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.9□□□□□ -1.47
Rfx3P48381 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
Rfx3P48381 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Rfx3P48381 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.9□□□□□ -1.47
Rfx3P48381 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Rfx3P48381 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Rfx3P48381 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.9□□□□□ -1.47
Rfx3P48381 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.9□□□□□ -1.47
Rfx3P48381 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.9□□□□□ -1.47
Rfx3P48381 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.89□□□□□ -1.47
Rfx3P48381 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Rfx3P48381 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm7746-201ENSMUST00000120966 503 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm5578-201ENSMUST00000121490 1236 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm14503-201ENSMUST00000130337 1164 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm24176-201ENSMUST00000158928 121 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm20615-201ENSMUST00000177503 705 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.89□□□□□ -1.47
Rfx3P48381 Mir6908-201ENSMUST00000184056 63 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm29383-201ENSMUST00000188284 480 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm18849-201ENSMUST00000189861 560 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm36965-201ENSMUST00000193797 394 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm42782-201ENSMUST00000197286 522 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm5711-201ENSMUST00000197896 421 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm43089-201ENSMUST00000199162 275 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC5.89□□□□□ -1.47
Rfx3P48381 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm17918-201ENSMUST00000205315 574 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC5.89□□□□□ -1.47
Rfx3P48381 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.89□□□□□ -1.47
Rfx3P48381 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm17849-201ENSMUST00000219788 853 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 AC124395.1-201ENSMUST00000225940 707 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Glycam1-204ENSMUST00000228895 641 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Rfx3P48381 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Rfx3P48381 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm5446-201ENSMUST00000091762 784 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Rfx3P48381 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Robo2-210ENSMUST00000226478 8059 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
Rfx3P48381 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm7690-201ENSMUST00000190885 1399 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gm37234-201ENSMUST00000193259 1441 ntBASIC5.89□□□□□ -1.47
Rfx3P48381 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Rfx3P48381 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx3P48381 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC5.89□□□□□ -1.47
Rfx3P48381 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx3P48381 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.88□□□□□ -1.47
Rfx3P48381 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx3P48381 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Rfx3P48381 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx3P48381 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx3P48381 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Rfx3P48381 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Rfx3P48381 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.88□□□□□ -1.47
Rfx3P48381 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC5.88□□□□□ -1.47
Rfx3P48381 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.88□□□□□ -1.47
Rfx3P48381 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms