Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Rfx1P48377 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Rfx1P48377 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC8.43□□□□□ -1.06
Rfx1P48377 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm16418-201ENSMUST00000118577 171 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm14251-201ENSMUST00000122133 279 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm11358-201ENSMUST00000122310 373 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC8.43□□□□□ -1.06
Rfx1P48377 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm22562-201ENSMUST00000157334 111 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm25669-201ENSMUST00000157699 112 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm23317-201ENSMUST00000157999 129 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm4613-201ENSMUST00000165488 276 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm24417-201ENSMUST00000178123 79 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm24653-201ENSMUST00000178541 79 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm25934-201ENSMUST00000178642 79 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Mir6239-201ENSMUST00000183564 105 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm6057-201ENSMUST00000195927 314 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm5154-201ENSMUST00000203971 399 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC8.43□□□□□ -1.06
Rfx1P48377 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm45739-201ENSMUST00000213094 388 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 AC116589.4-201ENSMUST00000222390 216 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC8.43□□□□□ -1.06
Rfx1P48377 AC165260.3-201ENSMUST00000225101 665 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 AC154594.1-201ENSMUST00000225171 1273 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Rfx1P48377 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Rfx1P48377 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Rfx1P48377 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Rfx1P48377 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Rfx1P48377 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Rfx1P48377 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.43□□□□□ -1.06
Rfx1P48377 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.43□□□□□ -1.06
Rfx1P48377 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.43□□□□□ -1.06
Rfx1P48377 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm14756-201ENSMUST00000116395 240 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm13566-201ENSMUST00000117428 1142 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm14893-201ENSMUST00000117904 282 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm12697-201ENSMUST00000118008 667 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm13038-201ENSMUST00000119886 459 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm25845-201ENSMUST00000122588 310 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm10913-201ENSMUST00000133732 463 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
Rfx1P48377 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Rfx1P48377 Mir7011-201ENSMUST00000183768 73 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm38022-201ENSMUST00000191762 403 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm19104-201ENSMUST00000198392 679 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.42□□□□□ -1.06
Rfx1P48377 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm44943-201ENSMUST00000207254 300 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm18510-201ENSMUST00000219335 1096 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms