Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HttP42859 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC6.64□□□□□ -1.35
HttP42859 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.63□□□□□ -1.35
HttP42859 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
HttP42859 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.63□□□□□ -1.35
HttP42859 Gm5306-201ENSMUST00000203325 757 ntBASIC6.63□□□□□ -1.35
HttP42859 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.63□□□□□ -1.35
HttP42859 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.63□□□□□ -1.35
HttP42859 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
HttP42859 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HttP42859 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
HttP42859 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HttP42859 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.63□□□□□ -1.35
HttP42859 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.63□□□□□ -1.35
HttP42859 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.63□□□□□ -1.35
HttP42859 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HttP42859 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
HttP42859 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.63□□□□□ -1.35
HttP42859 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HttP42859 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.63□□□□□ -1.35
HttP42859 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.63□□□□□ -1.35
HttP42859 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.63□□□□□ -1.35
HttP42859 Gm45777-201ENSMUST00000213009 301 ntBASIC6.63□□□□□ -1.35
HttP42859 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.63□□□□□ -1.35
HttP42859 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.63□□□□□ -1.35
HttP42859 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HttP42859 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC6.63□□□□□ -1.35
HttP42859 AC138284.3-201ENSMUST00000217345 4663 ntBASIC6.63□□□□□ -1.35
HttP42859 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.63□□□□□ -1.35
HttP42859 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
HttP42859 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HttP42859 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HttP42859 Gm13006-201ENSMUST00000118683 214 ntBASIC6.63□□□□□ -1.35
HttP42859 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.63□□□□□ -1.35
HttP42859 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HttP42859 Gm19206-201ENSMUST00000186401 827 ntBASIC6.63□□□□□ -1.35
HttP42859 Gm3841-201ENSMUST00000191399 451 ntBASIC6.63□□□□□ -1.35
HttP42859 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.63□□□□□ -1.35
HttP42859 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.63□□□□□ -1.35
HttP42859 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.63□□□□□ -1.35
HttP42859 Gm45739-201ENSMUST00000213094 388 ntBASIC6.63□□□□□ -1.35
HttP42859 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.63□□□□□ -1.35
HttP42859 Gm6068-201ENSMUST00000222270 387 ntBASIC6.63□□□□□ -1.35
HttP42859 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HttP42859 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.62□□□□□ -1.35
HttP42859 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.62□□□□□ -1.35
HttP42859 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.62□□□□□ -1.35
HttP42859 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
HttP42859 Gm12444-201ENSMUST00000121512 877 ntBASIC6.62□□□□□ -1.35
HttP42859 Gm12494-201ENSMUST00000121684 521 ntBASIC6.62□□□□□ -1.35
HttP42859 Gm23276-201ENSMUST00000157913 138 ntBASIC6.62□□□□□ -1.35
HttP42859 Gm24940-201ENSMUST00000158326 108 ntBASIC6.62□□□□□ -1.35
HttP42859 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.62□□□□□ -1.35
HttP42859 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.62□□□□□ -1.35
HttP42859 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.62□□□□□ -1.35
HttP42859 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC6.62□□□□□ -1.35
HttP42859 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HttP42859 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HttP42859 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HttP42859 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HttP42859 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HttP42859 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.62□□□□□ -1.35
HttP42859 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms