Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.37□□□□□ -1.23
Col2a1P28481 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm14529-201ENSMUST00000117894 406 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm14294-201ENSMUST00000119749 751 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm14712-201ENSMUST00000120195 772 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm8061-201ENSMUST00000122380 350 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm25246-201ENSMUST00000175476 69 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm18467-201ENSMUST00000208805 434 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm7499-201ENSMUST00000210423 813 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm33178-201ENSMUST00000212090 257 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm7570-201ENSMUST00000215246 698 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col2a1P28481 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col2a1P28481 Olfr519-201ENSMUST00000084752 960 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col2a1P28481 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.36□□□□□ -1.23
Col2a1P28481 AC154461.6-201ENSMUST00000224815 2630 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm4962-201ENSMUST00000199640 2977 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.36□□□□□ -1.23
Col2a1P28481 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm23440-201ENSMUST00000104299 130 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm11972-201ENSMUST00000118514 389 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm12396-201ENSMUST00000121600 306 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm12618-201ENSMUST00000121754 483 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm18290-201ENSMUST00000202900 844 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC7.36□□□□□ -1.23
Col2a1P28481 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col2a1P28481 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.36□□□□□ -1.23
Col2a1P28481 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col2a1P28481 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Col2a1P28481 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col2a1P28481 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.35□□□□□ -1.23
Col2a1P28481 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms