Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P20040 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
P20040 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P20040 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P20040 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
P20040 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.8□□□□□ -1.48
P20040 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.8□□□□□ -1.48
P20040 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P20040 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
P20040 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P20040 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.8□□□□□ -1.48
P20040 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
P20040 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
P20040 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.79□□□□□ -1.48
P20040 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
P20040 Gm2178-201ENSMUST00000104927 357 ntBASIC5.79□□□□□ -1.48
P20040 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.79□□□□□ -1.48
P20040 Gm11501-201ENSMUST00000118039 581 ntBASIC5.79□□□□□ -1.48
P20040 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.79□□□□□ -1.48
P20040 Gm12583-201ENSMUST00000120677 853 ntBASIC5.79□□□□□ -1.48
P20040 Gm11882-201ENSMUST00000121463 506 ntBASIC5.79□□□□□ -1.48
P20040 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Gm26046-201ENSMUST00000157312 166 ntBASIC5.79□□□□□ -1.48
P20040 Gm9359-201ENSMUST00000163721 1221 ntBASIC5.79□□□□□ -1.48
P20040 Gm22642-201ENSMUST00000175352 252 ntBASIC5.79□□□□□ -1.48
P20040 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Gm21392-201ENSMUST00000182950 972 ntBASIC5.79□□□□□ -1.48
P20040 Gm29156-201ENSMUST00000187764 499 ntBASIC5.79□□□□□ -1.48
P20040 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.79□□□□□ -1.48
P20040 Gm37383-201ENSMUST00000191750 745 ntBASIC5.79□□□□□ -1.48
P20040 Gm34144-201ENSMUST00000197039 259 ntBASIC5.79□□□□□ -1.48
P20040 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.79□□□□□ -1.48
P20040 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.79□□□□□ -1.48
P20040 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.79□□□□□ -1.48
P20040 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.79□□□□□ -1.48
P20040 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
P20040 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.79□□□□□ -1.48
P20040 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.79□□□□□ -1.48
P20040 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Gm5341-201ENSMUST00000058881 489 ntBASIC5.79□□□□□ -1.48
P20040 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.79□□□□□ -1.48
P20040 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
P20040 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.79□□□□□ -1.48
P20040 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.79□□□□□ -1.48
P20040 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.79□□□□□ -1.48
P20040 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC5.79□□□□□ -1.48
P20040 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Gm42597-201ENSMUST00000196663 1544 ntBASIC5.79□□□□□ -1.48
P20040 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P20040 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
P20040 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.78□□□□□ -1.48
P20040 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.78□□□□□ -1.48
P20040 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.78□□□□□ -1.48
P20040 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
P20040 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.78□□□□□ -1.48
P20040 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.78□□□□□ -1.48
P20040 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
P20040 Gm13141-201ENSMUST00000117417 456 ntBASIC5.78□□□□□ -1.48
P20040 Gm12375-201ENSMUST00000119331 921 ntBASIC5.78□□□□□ -1.48
P20040 Gm15187-201ENSMUST00000122329 264 ntBASIC5.78□□□□□ -1.48
P20040 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC5.78□□□□□ -1.48
P20040 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.78□□□□□ -1.48
P20040 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.78□□□□□ -1.48
P20040 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC5.78□□□□□ -1.48
P20040 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC5.78□□□□□ -1.48
P20040 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC5.78□□□□□ -1.48
P20040 Gm21301-201ENSMUST00000189476 699 ntBASIC5.78□□□□□ -1.48
P20040 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
P20040 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.78□□□□□ -1.48
P20040 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms