Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm26528-201ENSMUST00000181965 283 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm8245-201ENSMUST00000182434 987 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm21392-201ENSMUST00000182950 972 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm4545-201ENSMUST00000190797 603 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm37620-201ENSMUST00000192910 501 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Mir1897-202ENSMUST00000198006 79 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm7424-201ENSMUST00000206919 902 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 CT009754.4-201ENSMUST00000221430 565 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Sdc1P18828 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sdc1P18828 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
Sdc1P18828 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Sdc1P18828 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sdc1P18828 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Sdc1P18828 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm5601-201ENSMUST00000118909 972 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm14998-201ENSMUST00000120502 495 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm13357-201ENSMUST00000120528 537 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm12321-201ENSMUST00000121485 804 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm20691-201ENSMUST00000176889 333 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sdc1P18828 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm26509-201ENSMUST00000180947 948 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Mir8094-201ENSMUST00000183361 117 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm27152-201ENSMUST00000183828 99 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Ighv5-1-201ENSMUST00000193324 353 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm32102-201ENSMUST00000196885 241 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm7463-201ENSMUST00000201541 547 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC5.2□□□□□ -1.58
Sdc1P18828 AC107453.3-201ENSMUST00000228205 639 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sdc1P18828 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Sdc1P18828 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 AC124680.1-201ENSMUST00000223923 1585 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sdc1P18828 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Sdc1P18828 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.2□□□□□ -1.58
Sdc1P18828 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms