Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdx1P18111 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdx1P18111 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdx1P18111 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Cdx1P18111 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdx1P18111 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdx1P18111 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdx1P18111 Gm5361-201ENSMUST00000211041 1498 ntBASIC5.39□□□□□ -1.55
Cdx1P18111 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdx1P18111 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Cdx1P18111 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Cdx1P18111 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.38□□□□□ -1.55
Cdx1P18111 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Cdx1P18111 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Rnu11-201ENSMUST00000104135 134 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm6743-201ENSMUST00000117345 1066 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm15913-201ENSMUST00000118492 331 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm11928-201ENSMUST00000119323 437 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm12813-201ENSMUST00000119615 902 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm8916-201ENSMUST00000119732 949 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm11761-201ENSMUST00000121392 445 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm11263-201ENSMUST00000121853 749 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm11188-201ENSMUST00000122382 388 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm22024-201ENSMUST00000122733 287 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm23031-201ENSMUST00000157998 119 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm17511-201ENSMUST00000172206 342 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm43396-201ENSMUST00000197506 706 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm44463-201ENSMUST00000198895 137 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm44213-201ENSMUST00000204977 703 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm45478-201ENSMUST00000209472 211 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm7419-201ENSMUST00000209962 925 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm8290-201ENSMUST00000218202 477 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx1P18111 AC126554.3-201ENSMUST00000223131 493 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 CT025639.2-201ENSMUST00000224440 1220 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 CT009711.4-201ENSMUST00000225685 198 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Glycam1-204ENSMUST00000228895 641 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm38288-201ENSMUST00000195330 1320 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx1P18111 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Cdx1P18111 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm18726-201ENSMUST00000218175 2010 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdx1P18111 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.38□□□□□ -1.55
Cdx1P18111 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx1P18111 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms