Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm37649-201ENSMUST00000192079 2232 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 March7-201ENSMUST00000067542 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm15533-202ENSMUST00000206216 3262 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 AC159635.1-201ENSMUST00000220905 2102 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm10513-201ENSMUST00000194203 6468 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm44013-201ENSMUST00000204392 2262 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm12955-201ENSMUST00000119689 957 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm15028-201ENSMUST00000120295 370 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm12402-201ENSMUST00000120536 334 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm12178-201ENSMUST00000120545 330 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm12322-201ENSMUST00000121605 389 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxd3P09027 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm25372-201ENSMUST00000158161 255 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm25265-201ENSMUST00000158520 347 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm9593-201ENSMUST00000166034 469 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm22242-201ENSMUST00000175224 118 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm26587-201ENSMUST00000180795 989 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Mir6411-201ENSMUST00000183556 108 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Mir6415-201ENSMUST00000184064 100 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Scgb2b30-201ENSMUST00000187013 336 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxd3P09027 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Scgb2b10-201ENSMUST00000191403 318 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm36986-201ENSMUST00000195320 353 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm43711-201ENSMUST00000195994 373 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm43370-201ENSMUST00000196437 284 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm23604-202ENSMUST00000198428 137 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm19147-201ENSMUST00000199622 652 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm4742-201ENSMUST00000200261 771 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm6702-201ENSMUST00000208496 471 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm17994-201ENSMUST00000209260 533 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm2975-201ENSMUST00000209710 820 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm18781-201ENSMUST00000211252 924 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm46313-201ENSMUST00000220463 547 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 AC126691.2-201ENSMUST00000226185 249 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 AC113031.5-201ENSMUST00000227116 606 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm14267-208ENSMUST00000228324 1189 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 AC171241.2-201ENSMUST00000228744 892 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms