Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Gm11507-201ENSMUST00000156462 412 ntBASIC3.55□□□□□ -1.84
Herc1E9PZP8 Gm16269-201ENSMUST00000160532 409 ntBASIC3.55□□□□□ -1.84
Herc1E9PZP8 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC3.55□□□□□ -1.84
Herc1E9PZP8 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Gm44823-201ENSMUST00000204775 1107 ntBASIC3.55□□□□□ -1.84
Herc1E9PZP8 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc1E9PZP8 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm24935-201ENSMUST00000103770 110 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm9429-201ENSMUST00000117804 868 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm6584-201ENSMUST00000119671 447 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm12494-201ENSMUST00000121684 521 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm21070-201ENSMUST00000182425 985 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm43160-201ENSMUST00000196453 421 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm31211-201ENSMUST00000199170 253 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Igkv12-40-201ENSMUST00000199208 347 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm37326-201ENSMUST00000192828 3071 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm23879-201ENSMUST00000116874 126 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm23774-201ENSMUST00000158990 131 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Mir3078-201ENSMUST00000175231 87 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm8221-201ENSMUST00000178052 564 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Mir7087-201ENSMUST00000184840 70 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm43919-201ENSMUST00000204303 364 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm45910-201ENSMUST00000212493 1003 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm24924-201ENSMUST00000084007 164 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 AC138765.2-202ENSMUST00000228418 3435 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm38085-201ENSMUST00000195785 3062 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm43187-201ENSMUST00000200652 2397 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm42615-201ENSMUST00000197704 1820 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm45084-201ENSMUST00000207096 1957 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 n-R5s82-201ENSMUST00000104213 109 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm22899-201ENSMUST00000104540 131 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm8855-201ENSMUST00000118888 878 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm12807-201ENSMUST00000121546 962 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm22870-201ENSMUST00000157501 112 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm26318-201ENSMUST00000176507 96 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm29045-201ENSMUST00000187278 698 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm25592-201ENSMUST00000082635 131 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm9386-201ENSMUST00000095195 381 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm43719-201ENSMUST00000200088 2199 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm17076-201ENSMUST00000165185 1401 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm37738-201ENSMUST00000192396 4716 ntBASIC3.54□□□□□ -1.84
Herc1E9PZP8 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc1E9PZP8 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms