Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm22261-201ENSMUST00000158691 324 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Mir7006-201ENSMUST00000183624 69 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm29160-201ENSMUST00000190094 699 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm10513-201ENSMUST00000194203 6468 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm14836-201ENSMUST00000118567 471 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm14601-201ENSMUST00000120892 236 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm24303-201ENSMUST00000178237 126 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm7626-201ENSMUST00000195801 353 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm16335-201ENSMUST00000077495 309 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col4a6B1AVK5 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm20486-201ENSMUST00000101544 128 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm22094-201ENSMUST00000158976 117 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm6541-201ENSMUST00000165542 561 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm2959-201ENSMUST00000169844 621 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms