Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm29113-201ENSMUST00000185991 3432 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm44194-201ENSMUST00000204222 3229 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm7146-201ENSMUST00000116079 739 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm3943-201ENSMUST00000118606 718 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm16074-201ENSMUST00000119524 444 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm22917-201ENSMUST00000180116 110 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm37203-201ENSMUST00000191618 385 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm42584-201ENSMUST00000201404 220 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm31166-201ENSMUST00000209326 288 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm16335-201ENSMUST00000077495 309 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Gm24454-201ENSMUST00000083349 132 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.51□□□□□ -1.53
Col6a4A2AX52 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a4A2AX52 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm43970-201ENSMUST00000204346 3605 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm37109-201ENSMUST00000195475 2254 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm25795-201ENSMUST00000104421 132 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm13641-201ENSMUST00000117993 473 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm25722-201ENSMUST00000157498 279 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm2959-201ENSMUST00000169844 621 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm37380-201ENSMUST00000193752 397 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm37375-201ENSMUST00000193859 387 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm37385-201ENSMUST00000195223 387 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm43794-201ENSMUST00000200971 692 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm43798-201ENSMUST00000202056 394 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm5154-201ENSMUST00000203971 399 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm43982-201ENSMUST00000204995 1829 ntBASIC5.5□□□□□ -1.53
Col6a4A2AX52 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a4A2AX52 Gm15332-201ENSMUST00000118386 357 ntBASIC5.49□□□□□ -1.53
Col6a4A2AX52 Gm12768-201ENSMUST00000120055 759 ntBASIC5.49□□□□□ -1.53
Col6a4A2AX52 Gm12650-201ENSMUST00000121966 258 ntBASIC5.49□□□□□ -1.53
Col6a4A2AX52 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.49□□□□□ -1.53
Col6a4A2AX52 Gm22523-201ENSMUST00000158696 100 ntBASIC5.49□□□□□ -1.53
Col6a4A2AX52 Gm16164-201ENSMUST00000160078 468 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms