Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm13604-201ENSMUST00000119332 482 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm14613-201ENSMUST00000122239 752 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 BC064078-201ENSMUST00000122939 570 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm24782-201ENSMUST00000157641 132 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm23082-201ENSMUST00000157852 133 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm7481-201ENSMUST00000182020 995 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Mir6367-201ENSMUST00000183385 102 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm28060-201ENSMUST00000191554 189 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm34144-201ENSMUST00000197039 259 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm3678-201ENSMUST00000218888 492 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 AC102689.1-201ENSMUST00000220511 1090 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm17872-201ENSMUST00000222550 532 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 AC134254.4-201ENSMUST00000223086 370 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm19154-201ENSMUST00000223330 940 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sf3a3Q9D554 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm22152-201ENSMUST00000116966 125 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm11689-201ENSMUST00000120766 302 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm15061-201ENSMUST00000121076 1046 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm12321-201ENSMUST00000121485 804 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm6451-201ENSMUST00000121488 717 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm18595-201ENSMUST00000175736 1068 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm3307-201ENSMUST00000176164 632 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm29650-201ENSMUST00000188485 742 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm37614-201ENSMUST00000195645 210 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm8182-201ENSMUST00000197863 769 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm43141-201ENSMUST00000199695 274 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm42799-201ENSMUST00000201331 328 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm19596-201ENSMUST00000203685 739 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm18914-201ENSMUST00000214625 616 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Gm9801-201ENSMUST00000054860 408 ntBASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sf3a3Q9D554 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms