Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.17□□□□□ -1.42
Chmp1b1Q99LU0 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm2178-201ENSMUST00000104927 357 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm15149-201ENSMUST00000119370 360 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm23888-201ENSMUST00000122690 253 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm23958-201ENSMUST00000157207 105 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm20615-201ENSMUST00000177503 705 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm27156-201ENSMUST00000184589 754 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm7867-201ENSMUST00000189856 546 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm29141-201ENSMUST00000190357 882 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm37439-201ENSMUST00000193150 856 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm21054-201ENSMUST00000203981 380 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm44213-201ENSMUST00000204977 703 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm26226-201ENSMUST00000082509 116 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp1b1Q99LU0 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm15311-201ENSMUST00000119682 282 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm15305-201ENSMUST00000120354 288 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm7746-201ENSMUST00000120966 503 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm25556-201ENSMUST00000158077 144 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Mir7212-201ENSMUST00000184098 61 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm5244-202ENSMUST00000189517 743 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm43243-201ENSMUST00000199964 278 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm43377-201ENSMUST00000201640 455 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm44411-201ENSMUST00000204172 349 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Gm18914-201ENSMUST00000214625 616 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.15□□□□□ -1.42
Chmp1b1Q99LU0 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms