Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm26968-201ENSMUST00000182894 481 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Mir7033-201ENSMUST00000184259 81 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm29141-201ENSMUST00000190357 882 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm18426-201ENSMUST00000191874 973 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm37088-201ENSMUST00000193887 406 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Amd-ps5-201ENSMUST00000198406 989 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm43979-201ENSMUST00000203179 475 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm18387-201ENSMUST00000220333 702 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm9267-201ENSMUST00000222831 404 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 AC167669.3-201ENSMUST00000224720 393 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 CT009550.5-201ENSMUST00000226286 382 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm23104-201ENSMUST00000083722 104 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm23734-201ENSMUST00000083753 109 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm43292-201ENSMUST00000199580 2449 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm35172-201ENSMUST00000196037 2649 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm9439-201ENSMUST00000119554 973 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm6977-201ENSMUST00000121568 512 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm25780-201ENSMUST00000122528 253 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm25981-201ENSMUST00000157921 295 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm16026-205ENSMUST00000162923 641 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm17022-201ENSMUST00000166415 922 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm24824-201ENSMUST00000175097 78 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Mir378d-201ENSMUST00000184232 110 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm37727-201ENSMUST00000191637 819 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm37809-201ENSMUST00000195050 931 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm43383-201ENSMUST00000195981 469 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm44281-201ENSMUST00000203090 166 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm45658-201ENSMUST00000209197 580 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm18562-201ENSMUST00000209949 915 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC7.84□□□□□ -1.15
Clp1Q99LI9 Gm9655-201ENSMUST00000211321 1284 ntBASIC7.84□□□□□ -1.15
Clp1Q99LI9 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms