Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 AC153729.4-201ENSMUST00000217582 3826 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm38036-201ENSMUST00000194586 3564 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm8323-201ENSMUST00000168436 1201 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm2871-201ENSMUST00000179984 1204 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm27193-201ENSMUST00000184217 586 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm27617-201ENSMUST00000184321 168 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm18349-201ENSMUST00000187440 904 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm37770-201ENSMUST00000192855 772 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm9057-201ENSMUST00000198791 296 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm43243-201ENSMUST00000199964 278 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm24046-201ENSMUST00000083111 165 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm10705-201ENSMUST00000098980 461 ntBASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc9Q8VC31 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm23529-201ENSMUST00000104562 132 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm6746-201ENSMUST00000108774 483 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm15665-201ENSMUST00000119116 847 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm4835-201ENSMUST00000155839 972 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm24738-201ENSMUST00000158856 123 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm25164-201ENSMUST00000158908 116 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm17217-201ENSMUST00000166613 469 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm7393-201ENSMUST00000172650 739 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm20797-201ENSMUST00000177894 383 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm28164-201ENSMUST00000190143 442 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm44539-201ENSMUST00000206010 238 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm45008-201ENSMUST00000206420 493 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ccdc9Q8VC31 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Gm4973-201ENSMUST00000206925 1334 ntBASIC7.84□□□□□ -1.15
Ccdc9Q8VC31 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms