Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Vps39Q8R5L3 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Vps39Q8R5L3 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Vps39Q8R5L3 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Vps39Q8R5L3 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm23527-201ENSMUST00000104570 130 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm13141-201ENSMUST00000117417 456 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm13732-201ENSMUST00000117753 535 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm12677-201ENSMUST00000118668 426 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm15621-201ENSMUST00000119162 364 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm14614-201ENSMUST00000119873 384 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm12229-201ENSMUST00000120487 468 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm24422-201ENSMUST00000157800 119 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm23077-201ENSMUST00000157854 116 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm27360-201ENSMUST00000183487 80 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm9114-201ENSMUST00000188558 997 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm29214-201ENSMUST00000190216 570 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm8454-201ENSMUST00000196980 811 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm45279-201ENSMUST00000210315 391 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Vps39Q8R5L3 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm7821-201ENSMUST00000117111 788 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm12985-201ENSMUST00000118376 183 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm24545-201ENSMUST00000158651 85 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm5456-201ENSMUST00000170706 844 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm24465-201ENSMUST00000178398 107 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm17045-201ENSMUST00000178600 844 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm29141-201ENSMUST00000190357 882 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm21054-201ENSMUST00000203981 380 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Gm19092-201ENSMUST00000209036 969 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.54□□□□□ -1.36
Vps39Q8R5L3 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.54□□□□□ -1.36
Vps39Q8R5L3 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms