Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm25311-201ENSMUST00000104136 132 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm9427-201ENSMUST00000116187 651 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm13731-201ENSMUST00000117332 196 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm9432-201ENSMUST00000117810 759 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm3757-201ENSMUST00000125878 675 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Mir1930-201ENSMUST00000158799 84 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm23018-201ENSMUST00000177928 109 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm27033-201ENSMUST00000183226 544 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm27864-201ENSMUST00000183704 190 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm10416-201ENSMUST00000197379 645 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm42509-201ENSMUST00000197390 781 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm2860-201ENSMUST00000199226 707 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm45042-201ENSMUST00000207377 211 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm2221-201ENSMUST00000209342 418 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm9315-201ENSMUST00000222696 908 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 AC167192.4-201ENSMUST00000224087 993 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm25099-201ENSMUST00000093716 116 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm8995-202ENSMUST00000208417 3490 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm12104-201ENSMUST00000120359 979 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm16471-201ENSMUST00000121940 618 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm16248-201ENSMUST00000124238 243 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm24442-201ENSMUST00000157238 327 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm17022-201ENSMUST00000166415 922 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Mir8114-201ENSMUST00000183582 111 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms