Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm15216-201ENSMUST00000118058 277 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm13357-201ENSMUST00000120528 537 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm15164-201ENSMUST00000122203 271 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm25435-201ENSMUST00000158277 267 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm23810-201ENSMUST00000175150 74 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm19185-201ENSMUST00000196365 643 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm45626-201ENSMUST00000210093 361 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm45514-201ENSMUST00000211531 689 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm18914-201ENSMUST00000214625 616 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm7252-201ENSMUST00000223284 456 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup88Q8CEC0 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.71□□□□□ -1.17
Nup88Q8CEC0 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup88Q8CEC0 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Nup88Q8CEC0 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup88Q8CEC0 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Nup88Q8CEC0 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Nup88Q8CEC0 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.71□□□□□ -1.17
Nup88Q8CEC0 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup88Q8CEC0 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.71□□□□□ -1.17
Nup88Q8CEC0 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Nup88Q8CEC0 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup88Q8CEC0 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms