Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm28303-201ENSMUST00000185642 747 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29244-201ENSMUST00000185825 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29437-201ENSMUST00000185865 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29412-201ENSMUST00000185869 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28910-201ENSMUST00000185921 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28812-201ENSMUST00000185963 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29468-201ENSMUST00000185978 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28335-201ENSMUST00000186204 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28854-201ENSMUST00000186218 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28636-201ENSMUST00000186353 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28452-201ENSMUST00000186623 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29298-201ENSMUST00000186704 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28185-201ENSMUST00000186815 694 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28227-201ENSMUST00000186862 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28796-201ENSMUST00000186905 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29659-201ENSMUST00000187063 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28473-201ENSMUST00000187325 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28558-201ENSMUST00000187373 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28682-201ENSMUST00000187430 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28738-201ENSMUST00000187480 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28949-201ENSMUST00000187805 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28773-201ENSMUST00000187925 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29319-201ENSMUST00000188060 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29422-201ENSMUST00000188062 694 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28734-201ENSMUST00000188104 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28787-201ENSMUST00000188357 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29312-201ENSMUST00000188724 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29451-201ENSMUST00000188862 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29637-201ENSMUST00000188877 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29033-201ENSMUST00000189114 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29614-201ENSMUST00000189263 694 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28751-201ENSMUST00000189287 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29559-201ENSMUST00000189412 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28272-201ENSMUST00000189512 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28483-201ENSMUST00000189519 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28123-201ENSMUST00000189725 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28368-201ENSMUST00000189804 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29119-201ENSMUST00000189973 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28745-201ENSMUST00000190069 305 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28716-201ENSMUST00000190217 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29239-201ENSMUST00000190304 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28837-201ENSMUST00000190397 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28968-201ENSMUST00000190413 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28531-201ENSMUST00000190529 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28165-201ENSMUST00000190669 694 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm29181-201ENSMUST00000191288 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm38229-201ENSMUST00000191931 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm32347-201ENSMUST00000192944 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm38121-201ENSMUST00000193213 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm38035-201ENSMUST00000194427 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm38350-201ENSMUST00000194789 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm37676-201ENSMUST00000195496 507 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm37990-201ENSMUST00000195821 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 AC157085.1-201ENSMUST00000216343 162 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm26340-201ENSMUST00000102365 99 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm11581-201ENSMUST00000122024 763 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm15242-201ENSMUST00000122459 283 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm23945-201ENSMUST00000179609 92 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm27804-201ENSMUST00000185135 119 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Gm38068-201ENSMUST00000192546 540 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 AC166574.3-201ENSMUST00000226725 367 ntBASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Vps53Q8CCB4 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms