Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Atg4aQ8C9S8 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.83□□□□□ -1.16
Atg4aQ8C9S8 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.83□□□□□ -1.16
Atg4aQ8C9S8 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.83□□□□□ -1.16
Atg4aQ8C9S8 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Atg4aQ8C9S8 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Atg4aQ8C9S8 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm37864-201ENSMUST00000195308 3075 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm24989-201ENSMUST00000104461 88 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm8250-201ENSMUST00000117398 774 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm14747-201ENSMUST00000149888 984 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm7554-201ENSMUST00000202282 574 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 AC136376.1-201ENSMUST00000228496 950 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Atg4aQ8C9S8 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm26340-201ENSMUST00000102365 99 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm12375-201ENSMUST00000119331 921 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm15501-202ENSMUST00000140687 625 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mir5107-201ENSMUST00000175586 88 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm25244-201ENSMUST00000178089 132 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm37770-201ENSMUST00000192855 772 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm44225-201ENSMUST00000203582 186 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm9293-201ENSMUST00000223096 306 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.81□□□□□ -1.16
Atg4aQ8C9S8 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms