Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim9Q8C7M3 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.23□□□□□ -1.25
Trim9Q8C7M3 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim9Q8C7M3 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.23□□□□□ -1.25
Trim9Q8C7M3 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.23□□□□□ -1.25
Trim9Q8C7M3 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim9Q8C7M3 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim9Q8C7M3 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim9Q8C7M3 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.23□□□□□ -1.25
Trim9Q8C7M3 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.23□□□□□ -1.25
Trim9Q8C7M3 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.23□□□□□ -1.25
Trim9Q8C7M3 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.23□□□□□ -1.25
Trim9Q8C7M3 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim9Q8C7M3 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm24790-201ENSMUST00000104285 132 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm25344-201ENSMUST00000104503 132 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm22709-201ENSMUST00000116893 111 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm12842-201ENSMUST00000117298 476 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm14631-201ENSMUST00000119067 594 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm15501-202ENSMUST00000140687 625 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm25435-201ENSMUST00000158277 267 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm23259-201ENSMUST00000158318 303 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm22094-201ENSMUST00000158976 117 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm6434-201ENSMUST00000163316 372 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm27185-201ENSMUST00000184296 247 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm28438-201ENSMUST00000188299 345 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm43396-201ENSMUST00000197506 706 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm2225-201ENSMUST00000209570 377 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim9Q8C7M3 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Trim9Q8C7M3 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Trim9Q8C7M3 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Trim9Q8C7M3 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.21□□□□□ -1.25
Trim9Q8C7M3 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Trim9Q8C7M3 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Trim9Q8C7M3 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Rnu11-201ENSMUST00000104135 134 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm26422-201ENSMUST00000104276 132 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm14755-201ENSMUST00000118037 384 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm15225-201ENSMUST00000120449 1017 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm14847-201ENSMUST00000121978 519 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm23888-201ENSMUST00000122690 253 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm10136-201ENSMUST00000183196 435 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm38068-201ENSMUST00000192546 540 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm8454-201ENSMUST00000196980 811 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm43576-201ENSMUST00000197937 871 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm43894-201ENSMUST00000203274 688 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Gm44845-201ENSMUST00000208773 335 ntBASIC7.21□□□□□ -1.26
Trim9Q8C7M3 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim9Q8C7M3 AC131743.3-201ENSMUST00000222099 662 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms