Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm23323-201ENSMUST00000104471 133 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm12392-201ENSMUST00000118014 938 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm11517-201ENSMUST00000119491 387 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm12433-201ENSMUST00000119659 255 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm5406-201ENSMUST00000120054 766 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm24385-201ENSMUST00000122694 350 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm16276-201ENSMUST00000131218 262 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm23034-201ENSMUST00000158001 147 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm5611-201ENSMUST00000164523 852 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm25692-201ENSMUST00000175444 125 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm20612-201ENSMUST00000176318 236 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm27401-201ENSMUST00000184052 173 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm28894-201ENSMUST00000185214 615 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm37369-201ENSMUST00000194179 615 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm20690-202ENSMUST00000195126 355 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm5723-201ENSMUST00000203096 432 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm8189-203ENSMUST00000211159 1225 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm19936-201ENSMUST00000216414 838 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 AC132384.8-201ENSMUST00000218152 1204 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm9628-201ENSMUST00000222169 725 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 AC133283.1-201ENSMUST00000228443 859 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim47Q8C0E3 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm17184-201ENSMUST00000111864 462 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm14879-201ENSMUST00000117308 507 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm7834-201ENSMUST00000117560 437 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm8624-201ENSMUST00000118083 432 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm11859-201ENSMUST00000118099 455 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm14985-201ENSMUST00000118693 786 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm13711-201ENSMUST00000119708 453 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm16330-201ENSMUST00000128324 297 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm9697-201ENSMUST00000147052 997 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm24782-201ENSMUST00000157641 132 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm26402-201ENSMUST00000158499 113 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm22945-201ENSMUST00000158557 157 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm6921-201ENSMUST00000161478 435 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm24300-201ENSMUST00000177809 109 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm24017-201ENSMUST00000178726 109 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm23952-201ENSMUST00000179380 109 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm5445-201ENSMUST00000180224 480 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm28164-201ENSMUST00000190143 442 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm38337-201ENSMUST00000193986 599 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm19035-202ENSMUST00000194575 959 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms