Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Usp54Q8BL06 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm11242-201ENSMUST00000120103 2457 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp54Q8BL06 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 AC159308.1-201ENSMUST00000216615 1351 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm5512-201ENSMUST00000218013 1353 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Mir466f-4-201ENSMUST00000116930 121 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm6472-201ENSMUST00000178147 651 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm8454-201ENSMUST00000196980 811 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm5886-202ENSMUST00000203957 522 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 AC122371.2-201ENSMUST00000220583 366 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm16335-201ENSMUST00000077495 309 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm28583-201ENSMUST00000188903 2141 ntBASIC9.17□□□□□ -0.94
Usp54Q8BL06 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp54Q8BL06 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm8424-201ENSMUST00000117716 988 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm14900-201ENSMUST00000120304 733 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm12181-201ENSMUST00000121448 531 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm23408-201ENSMUST00000158523 265 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm24957-201ENSMUST00000179604 132 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm45724-201ENSMUST00000213031 420 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm8863-201ENSMUST00000216630 926 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm45073-201ENSMUST00000207688 4247 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm5832-201ENSMUST00000121704 1582 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 AC131747.2-201ENSMUST00000226121 1895 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 AC098728.1-202ENSMUST00000226656 2198 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm23995-201ENSMUST00000158060 129 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm28847-201ENSMUST00000186778 700 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm44795-201ENSMUST00000205496 319 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm44833-201ENSMUST00000208368 331 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Gm9237-201ENSMUST00000221499 548 ntBASIC9.16□□□□□ -0.94
Usp54Q8BL06 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp54Q8BL06 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp54Q8BL06 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp54Q8BL06 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms