Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm24621-201ENSMUST00000082679 140 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm24451-201ENSMUST00000083353 133 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm17165-201ENSMUST00000096155 493 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm37960-201ENSMUST00000192402 1897 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm4806-201ENSMUST00000222704 1690 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm16536-201ENSMUST00000162209 1589 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm12303-201ENSMUST00000119506 673 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm22795-201ENSMUST00000157233 118 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm24176-201ENSMUST00000158928 121 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm9286-201ENSMUST00000173586 508 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm27853-201ENSMUST00000184176 250 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm18036-201ENSMUST00000195256 272 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm18980-201ENSMUST00000199098 1079 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm9292-201ENSMUST00000222008 710 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 CT573019.1-201ENSMUST00000227762 1689 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Gm42576-201ENSMUST00000202336 2846 ntBASIC5.69□□□□□ -1.5
Rif1Q6PR54 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm16164-201ENSMUST00000160078 468 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm27006-201ENSMUST00000182218 943 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm5372-201ENSMUST00000187540 409 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm3189-201ENSMUST00000205595 832 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm7802-201ENSMUST00000216464 262 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm43839-201ENSMUST00000196183 2325 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm24685-201ENSMUST00000157764 285 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm24534-201ENSMUST00000157949 291 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm21850-201ENSMUST00000179792 359 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm7463-201ENSMUST00000201541 547 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.68□□□□□ -1.5
Rif1Q6PR54 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rif1Q6PR54 AC154461.6-201ENSMUST00000224815 2630 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms