Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm37630-201ENSMUST00000194210 1456 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC9.64□□□□□ -0.87
Clcn1Q64347 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 n-R5s172-201ENSMUST00000104508 114 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm15644-201ENSMUST00000121764 387 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm14728-201ENSMUST00000122196 492 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm25692-201ENSMUST00000175444 125 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm27186-201ENSMUST00000184223 307 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm19057-201ENSMUST00000194329 1197 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm19035-202ENSMUST00000194575 959 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm42760-201ENSMUST00000199814 311 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 AC122360.1-201ENSMUST00000217737 624 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 AC159205.2-201ENSMUST00000223759 816 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 AC124397.1-201ENSMUST00000224296 653 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 AC122034.1-201ENSMUST00000227641 595 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 AC133283.1-201ENSMUST00000228443 859 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 CT025525.3-201ENSMUST00000228858 366 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC9.63□□□□□ -0.87
Clcn1Q64347 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clcn1Q64347 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Clcn1Q64347 AC105407.2-205ENSMUST00000224680 2733 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clcn1Q64347 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm25943-201ENSMUST00000103791 90 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Mir466b-7-201ENSMUST00000103804 88 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Mir466b-5-201ENSMUST00000103900 88 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm13229-201ENSMUST00000118238 340 ntBASIC9.62□□□□□ -0.87
Clcn1Q64347 Gm13156-201ENSMUST00000118348 321 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms