Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm37376-201ENSMUST00000192176 453 ntBASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.78□□□□□ -1.16
Vps54Q5SPW0 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm9788-201ENSMUST00000057038 906 ntBASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.78□□□□□ -1.16
Vps54Q5SPW0 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.77□□□□□ -1.16
Vps54Q5SPW0 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.77□□□□□ -1.16
Vps54Q5SPW0 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm25346-201ENSMUST00000104509 128 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm11256-201ENSMUST00000118109 829 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm24405-201ENSMUST00000083033 167 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Vps54Q5SPW0 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm6977-201ENSMUST00000121568 512 ntBASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm22428-201ENSMUST00000158554 132 ntBASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm23343-201ENSMUST00000158964 143 ntBASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.76□□□□□ -1.17
Vps54Q5SPW0 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms