Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm22504-201ENSMUST00000082963 139 ntBASIC6□□□□□ -1.45
Scn1bP97952 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6□□□□□ -1.45
Scn1bP97952 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6□□□□□ -1.45
Scn1bP97952 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Scn1bP97952 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Gm42508-201ENSMUST00000199972 3292 ntBASIC6□□□□□ -1.45
Scn1bP97952 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Scn1bP97952 Gm4994-201ENSMUST00000118379 2187 ntBASIC6□□□□□ -1.45
Scn1bP97952 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Scn1bP97952 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Scn1bP97952 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Scn1bP97952 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm17170-201ENSMUST00000112785 316 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm13702-201ENSMUST00000118542 825 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm12219-201ENSMUST00000119198 443 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm12307-201ENSMUST00000120581 590 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm11257-201ENSMUST00000121313 315 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC5.99□□□□□ -1.45
Scn1bP97952 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm25722-201ENSMUST00000157498 279 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm20813-201ENSMUST00000186646 705 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm21923-201ENSMUST00000188455 696 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm37444-201ENSMUST00000193605 439 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm38079-201ENSMUST00000195603 154 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Gm7394-201ENSMUST00000209138 1032 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Scn1bP97952 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 AC118006.3-201ENSMUST00000223948 1176 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 AC158981.1-201ENSMUST00000226943 1205 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm20900-201ENSMUST00000078729 472 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.99□□□□□ -1.45
Scn1bP97952 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Scn1bP97952 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Scn1bP97952 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scn1bP97952 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scn1bP97952 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scn1bP97952 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scn1bP97952 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.98□□□□□ -1.45
Scn1bP97952 Gm24986-201ENSMUST00000104452 132 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Scn1bP97952 Gm11371-201ENSMUST00000120294 385 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Scn1bP97952 Gm24782-201ENSMUST00000157641 132 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 Gm7707-201ENSMUST00000165950 1156 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 Gm6726-201ENSMUST00000172786 681 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 Gm27401-201ENSMUST00000184052 173 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC5.98□□□□□ -1.45
Scn1bP97952 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC5.98□□□□□ -1.45
Scn1bP97952 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC5.98□□□□□ -1.45
Scn1bP97952 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scn1bP97952 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 Gm4270-201ENSMUST00000209666 406 ntBASIC5.98□□□□□ -1.45
Scn1bP97952 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms