Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm13193-201ENSMUST00000117275 225 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm23071-201ENSMUST00000158242 115 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm2053-201ENSMUST00000195671 631 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm43098-201ENSMUST00000199989 1297 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Supt4b-201ENSMUST00000214434 351 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 AC132384.8-201ENSMUST00000218152 1204 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 AC122327.2-201ENSMUST00000220883 120 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 AC122327.3-201ENSMUST00000221852 120 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 AC166341.1-201ENSMUST00000223360 105 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm43876-201ENSMUST00000203831 3229 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PrkdcP97313 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 M6pr-ps-201ENSMUST00000120481 830 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm12229-201ENSMUST00000120487 468 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm14563-201ENSMUST00000120571 354 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.31□□□□□ -1.72
PrkdcP97313 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PrkdcP97313 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm7961-201ENSMUST00000201338 1436 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm5386-201ENSMUST00000121749 2450 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PrkdcP97313 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PrkdcP97313 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm12494-201ENSMUST00000121684 521 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.31□□□□□ -1.72
PrkdcP97313 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Mir6992-201ENSMUST00000183342 109 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm5334-201ENSMUST00000187472 720 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 AC134254.2-201ENSMUST00000221262 170 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm12077-201ENSMUST00000117049 364 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm20545-201ENSMUST00000174739 210 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC4.31□□□□□ -1.72
PrkdcP97313 Gm28429-201ENSMUST00000188521 363 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.31□□□□□ -1.72
PrkdcP97313 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
PrkdcP97313 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PrkdcP97313 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PrkdcP97313 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm44416-201ENSMUST00000204055 2066 ntBASIC4.3□□□□□ -1.72
PrkdcP97313 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PrkdcP97313 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PrkdcP97313 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PrkdcP97313 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PrkdcP97313 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms