Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm44141-201ENSMUST00000204231 1583 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm14202-201ENSMUST00000120121 311 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm12593-201ENSMUST00000120981 743 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Sf3b6P59708 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm24211-201ENSMUST00000158264 107 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm22424-201ENSMUST00000158527 87 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm6838-201ENSMUST00000172851 582 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm27018-201ENSMUST00000181136 225 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm8609-201ENSMUST00000182967 998 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm29739-201ENSMUST00000191760 529 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm17970-201ENSMUST00000192199 685 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm18752-201ENSMUST00000192876 608 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm36378-201ENSMUST00000201709 388 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm43979-201ENSMUST00000203179 475 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm38840-201ENSMUST00000204716 843 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.54□□□□□ -1.36
Sf3b6P59708 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 AC154727.1-201ENSMUST00000226537 499 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 AC099629.1-201ENSMUST00000226778 464 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm7086-202ENSMUST00000228849 506 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sf3b6P59708 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.54□□□□□ -1.36
Sf3b6P59708 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sf3b6P59708 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm23692-201ENSMUST00000101881 160 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm22934-201ENSMUST00000103961 132 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm23485-201ENSMUST00000104181 155 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm14945-201ENSMUST00000119556 1118 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm5255-201ENSMUST00000120125 642 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm13720-201ENSMUST00000120741 196 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm3835-201ENSMUST00000120752 403 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms