Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm24519-201ENSMUST00000104507 132 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm15105-201ENSMUST00000117777 204 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm12152-201ENSMUST00000122465 684 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.15□□□□□ -1.26
Tpm1P58771 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tpm1P58771 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.15□□□□□ -1.26
Tpm1P58771 Gm18709-201ENSMUST00000180564 489 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.15□□□□□ -1.26
Tpm1P58771 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.15□□□□□ -1.26
Tpm1P58771 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
Tpm1P58771 Gm3121-201ENSMUST00000187086 406 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm20926-201ENSMUST00000194457 696 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.15□□□□□ -1.26
Tpm1P58771 Gm7463-201ENSMUST00000201541 547 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm20274-201ENSMUST00000206967 584 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tpm1P58771 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.15□□□□□ -1.26
Tpm1P58771 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Gm18628-201ENSMUST00000220584 475 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.15□□□□□ -1.26
Tpm1P58771 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tpm1P58771 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Tpm1P58771 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Tpm1P58771 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tpm1P58771 Gm9239-201ENSMUST00000186942 2557 ntBASIC7.15□□□□□ -1.26
Tpm1P58771 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tpm1P58771 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tpm1P58771 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.15□□□□□ -1.27
Tpm1P58771 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Tpm1P58771 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.15□□□□□ -1.27
Tpm1P58771 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Tpm1P58771 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Tpm1P58771 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Tpm1P58771 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.15□□□□□ -1.27
Tpm1P58771 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Tpm1P58771 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Tpm1P58771 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.14□□□□□ -1.27
Tpm1P58771 Gm14038-201ENSMUST00000121500 807 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Gm22094-201ENSMUST00000158976 117 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Tpm1P58771 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Gm28894-201ENSMUST00000185214 615 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Gm37369-201ENSMUST00000194179 615 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Gm2566-201ENSMUST00000201267 431 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Gm31579-201ENSMUST00000203306 966 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Gm45319-201ENSMUST00000210220 318 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Tpm1P58771 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Tpm1P58771 AC129219.1-201ENSMUST00000224336 448 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.14□□□□□ -1.27
Tpm1P58771 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Tpm1P58771 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC7.14□□□□□ -1.27
Tpm1P58771 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Tpm1P58771 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Tpm1P58771 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Tpm1P58771 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Tpm1P58771 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Tpm1P58771 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC7.13□□□□□ -1.27
Tpm1P58771 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Tpm1P58771 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Tpm1P58771 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Tpm1P58771 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Tpm1P58771 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Tpm1P58771 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Tpm1P58771 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Tpm1P58771 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.13□□□□□ -1.27
Tpm1P58771 Gm14513-201ENSMUST00000117403 123 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gm12135-201ENSMUST00000119170 466 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gm13604-201ENSMUST00000119332 482 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gm14300-201ENSMUST00000120800 946 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gm12026-201ENSMUST00000120961 1024 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Gm24176-201ENSMUST00000158928 121 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Mir6930-201ENSMUST00000183859 68 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 Mir6241-201ENSMUST00000184225 103 ntBASIC7.13□□□□□ -1.27
Tpm1P58771 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Tpm1P58771 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms